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铁死亡调控因子在 33 种癌症类型中的分子机制、免疫学特征及免疫治疗反应的整合分析

英文原题:Integrative analysis of the molecular mechanisms, immunological features and immunotherapy response of ferroptosis regulators across 33 cancer types.

查看英文原题

Integrative analysis of the molecular mechanisms, immunological features and immunotherapy response of ferroptosis regulators across 33 cancer types.

PubMed 2022/01/01(内容时间) Int J Biol Sci Q1 · IF 11.7(JCR 2025)

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中文摘要

铁死亡是最近描述的一种细胞死亡方式,由细胞内铁和脂质活性氧(ROS)积累引起,在肿瘤发生和癌症进展中起关键作用。然而,癌症中铁死亡的潜在分子机制和有前景的生物标志物仍有待阐明。

在本研究中,我们在33种癌症类型中鉴定并分析了铁死亡相关信号通路中的30个铁死亡调节因子。我们发现了转录组异常,并评估了铁死亡调节因子在33种癌症类型中的预后价值。然后,我们预测并验证了靶向癌症中铁死亡调节因子的潜在转录因子(包括E2F7、KLF5和FOXM1)和治疗药物(如环磷酰胺、长春碱和吉非替尼)。

此外,我们探索了铁死亡的分子机制,发现IL-1和IL-2等信号通路与铁死亡密切相关。另外,我们发现铁死亡调节因子与免疫相关参数密切相关,包括免疫评分、免疫细胞浸润水平和免疫检查点蛋白水平。

最后,我们使用GSVA方法确定了铁死亡评分。我们发现铁死亡评分有效预测了肿瘤样本中的铁死亡细胞死亡。并且铁死亡评分可作为癌症发生和复发的独立预后指标。更重要的是,铁死亡评分高的患者从免疫治疗中获益更大。

我们还创建了一个基于列线图预后模型的在线网络服务器,用于预测免疫治疗队列中的生存。这一结果的原因部分在于高铁死亡率的患者同时也具有高免疫评分、HLA相关基因表达和免疫检查点蛋白表达,如PDL2和TIM3。

此外,高铁死亡评分患者表现出CD8 T细胞和TIL浸润以及免疫相关信号通路富集。总之,我们系统总结了铁死亡在多种癌症中的分子特征、临床相关性和免疫特征,并表明铁死亡评分可作为预后因素及用于评估免疫治疗效果。

展开英文摘要原文

Ferroptosis is a recently described mode of cell death caused by the accumulation of intracellular iron and lipid reactive oxygen species (ROS), which play critical roles in tumorigenesis and cancer progression.

However, the underlying molecular mechanisms and promising biomarkers of ferroptosis among cancers remain to be elucidated. In this study, 30 ferroptosis regulators in ferroptosis-related signaling pathways were identified and analyzed in 33 cancer types.

We found transcriptomic aberrations and evaluated the prognostic value of ferroptosis regulators across 33 cancer types. Then, we predicted and validated potential transcription factors (including E2F7, KLF5 and FOXM1) and therapeutic drugs (such as cyclophosphamide, vinblastine, and gefitinib) that target ferroptosis regulators in cancer.

Moreover, we explored the molecular mechanisms of ferroptosis and found that signaling pathways such as the IL-1 and IL-2 pathways are closely associated with ferroptosis.

Additionally, we found that ferroptosis regulators have a close relationship with immunity-related parameters, including the immune score, immune cell infiltration level, and immune checkpoint protein level.

Finally, we determined a ferroptosis score using GSVA method.

We found that the ferroptosis score effectively predicted ferroptotic cell death in tumor samples. And ferroptosis score is served as an independent prognostic indicator for the incidence and recurrence of cancers. More importantly, patients with high ferroptosis scores received greater benefit from immunotherapy.

We aslo created an online webserver based on the nomogram prognostic model to predict the survival in immunotherapy cohort. The reason for this outcome is partially the result of patients with a high ferroptosis rate also having high immune scores, HLA-related gene expression and immune checkpoint protein expression, such as PDL2 and TIM3.

Moreover, patients with high ferroptosis scores exhibited CD8 T cell and TIL infiltration and immune-related signaling pathway enrichment. In summary, we systematically summarize the molecular characteristics, clinical relevance and immune features of ferroptosis across cancers and show that the ferroptosis score can be used as a prognostic factor and for the evaluation of immunotherapy effects.

论文信息

作者
Tang B、Yan R、Zhu J、Cheng S、Kong C、Chen W、Fang S、Wang Y
单位
Key Laboratory of Imaging Diagnosis and Minimally Invasive Intervention Research, Lishui Hospital, School of Medicine, Zhejiang University, Lishui 323000, China.China
文献类型
非美国政府资助研究
期刊
International journal of biological sciences2022
原文标识
PubMed 34975326 · DOI 10.7150/ijbs.64654