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整合单细胞和基因组分析揭示 NMB 通过代谢重编程和免疫逃逸驱动食管鳞状细胞癌的转移适应

英文原题:Integrative single-cell and genomic analysis reveals NMB as a driver of metastatic adaptation in esophageal squamous cell carcinoma via metabolic rewiring and immune evasion.

PubMed 2026/08/31(内容时间) Front Cell Dev Biol Q1 · IF 5.3(JCR 2025)

研究概要

NMB是ESCC转移适应的关键驱动因素,通过基因组进化和免疫重塑在转移定植过程中赋予肿瘤细胞生存优势,代谢适应是基因组改变的下游结果。

研究思路结论见上方概要

食管鳞状细胞癌(ESCC)死亡率高,转移是导致患者死亡的主要原因。神经介素B(NMB)在多种癌症中促进肿瘤发展,但其在ESCC转移中的作用仍不清楚。

我们将配对的食管鳞状细胞癌原发灶和转移灶的单细胞转录组数据(GSE309392)与来自TCGA和GSE53624的批量转录组队列进行了整合。进行了计算机基因扰动、配体-受体通讯分析和单细胞预后模型构建,随后通过在TE-1和KYSE30细胞系中siRNA介导的NMB敲低进行了功能验证。

NMB被鉴定为在转移性ESCC病灶中富集的关键基因,其高表达与氧化磷酸化通路基因及醛酮还原酶家族抗氧化酶(AKR1C1、AKR1C2、AKR1B10)的协同上调相关。基因组分析显示,NMB高表达肿瘤携带更高的克隆突变负荷,且NFE2L2激活突变频率显著增加(23% vs 8%,P = 0.04)。计算机模拟敲除与相关性分析确定AKR1C1为NMB的下游效应因子。NMB表达与CD8 + T细胞及活化NK细胞浸润呈负相关。CellChat分析揭示NMB阳性细胞与单核细胞通过TGM2-ADGRG1轴进行通讯,并特异性检测到IFNG信号。在单细胞预后模型中,NMB阳性细胞占高风险组的50%,但仅占低风险组的20%。基于TCGA的生存分析表明,NMB高表达与较短的总生存期相关(HR = 2.98,P = 0.03)。体外NMB靶向RNA干扰显著抑制了TE-1和KYSE30细胞的增殖、集落形成和迁移。CMap筛选确定内皮素-PDE5-cGMP轴为潜在治疗靶点。

展开英文摘要原文

BACKGROUND: Esophageal squamous cell carcinoma (ESCC) has high mortality, and metastasis is the leading cause of patient death. Neuromedin B (NMB) promotes tumor development in various cancers, yet its role in ESCC metastasis remains unclear. METHODS: We integrated single-cell transcriptomic data from matched primary and metastatic ESCC lesions (GSE309392) with bulk transcriptomic cohorts from TCGA and GSE53624. In silico gene perturbation, ligand-receptor communication analysis, and single-cell prognostic model construction were performed, followed by functional validation through siRNA-mediated NMB knockdown in TE-1 and KYSE30 cell lines. RESULTS: NMB was identified as a key gene enriched in metastatic ESCC lesions, and its high expression was associated with coordinated upregulation of oxidative phosphorylation pathway genes and aldo-keto reductase family antioxidant enzymes (AKR1C1, AKR1C2, AKR1B10). Genomic analysis revealed that NMB-high tumors carried a higher clonal mutation burden and a markedly increased frequency of NFE2L2 activating mutations (23% vs . 8%, P = 0.04). In silico knockout and correlation analysis identified AKR1C1 as a downstream effector of NMB. NMB expression was negatively correlated with CD8 + T cell and activated NK cell infiltration. CellChat analysis revealed communication between NMB-positive cells and monocytes via the TGM2-ADGRG1 axis, and specifically detected IFNG signaling. In the single-cell prognostic model, NMB-positive cells accounted for 50% of the high-risk group but only 20% of the low-risk group. TCGA-based survival analysis demonstrated that high NMB expression was associated with shorter overall survival (HR = 2.98, P = 0.03). In vitro NMB-targeted RNA interference markedly inhibited proliferation, colony formation, and migration in TE-1 and KYSE30 cells. CMap screening identified the endothelin-PDE5-cGMP axis as a potential therapeutic target. CONCLUSION: NMB serves as a key driver of metastatic adaptation in ESCC, conferring a survival advantage to tumor cells during metastatic colonization through genomic evolution and immune remodeling, with metabolic adaptation as a downstream consequence of genomic alterations.

论文信息

作者
Cao Z、Tian D、He L、Zhang J、Zeng J、Tian Y、Liu X、Li Y
第一作者单位
Department of Thoracic Surgery, The Affiliated LiHuiLi Hospital of Ningbo University, Ningbo, Zhejiang, China.China
通讯作者单位
Health Science Center, Ningbo University, Ningbo, Zhejiang, China.China
期刊
Frontiers in cell and developmental biology2026
原文标识
PubMed 42740929 · DOI 10.3389/fcell.2026.1914292