研究概要
CD3ζ过表达在TCR-NK细胞工程中并非中性修饰。它与广泛的转录重塑和激活相关信号变化有关,这可能为先前观察到的非特异性活性增加提供分子背景。这些发现支持TCR-NK工程策略,即保留内源性CD3ζ调控,同时仅引入功能性TCR表达所需的缺失CD3δγε组分。
研究思路结论见上方概要
目的
TCR工程化NK细胞代表了一种有前景的策略,能够靶向细胞内肿瘤抗原,同时克服TCR工程化T细胞固有的TCR α/β链错配风险。既往研究表明,TCR-NK细胞中CD3ζ过表达并未改善抗原特异性细胞毒性,反而增加了非特异性背景反应性。本研究旨在通过检测工程化NK-92细胞的转录组谱,探讨与这一表型相关的分子改变。
方法
分析了表达酪氨酸酶特异性TCR的野生型和基因修饰NK-92细胞系,这些细胞系有或无CD3ζ过表达。随后进行批量RNA测序,并进行差异基因表达分析、层次聚类、多维标度和通路富集分析。通过流式细胞术评估CD28表面表达,并在CD3/CD28刺激后通过western blotting评估激活相关信号反应。
结果
过表达CD3ζ的NK-92细胞形成了独特的转录组聚类,并表现出更广泛的基因表达变化。单独表达CD3δγε或与酪氨酸酶特异性TCR联合表达时,与空载体对照相比,转录水平的差异相对有限,而CD3ζ的引入使富集通路向淋巴细胞活化、细胞毒性和PI3K-AKT相关信号传导方向偏移。过表达CD3ζ的细胞还表现出CD28表面表达增加以及磷酸化模式改变,其中最显著的是在CD3/CD28刺激下涉及AKT的变化。
展开英文摘要原文
OBJECTIVE: TCR-engineered NK cells represent a promising strategy for targeting intracellular tumor antigens while overcoming the risk of TCR alpha/beta chain mispairing inherent to TCR-engineered T cells. Previous work showed that CD3ζ overexpression in TCR-NK cells did not improve antigen-specific cytotoxicity and instead increased non-specific background reactivity. This study aims to investigate the molecular alterations associated with this phenotype by examining the transcriptomic profile of engineered NK-92 cells.
MATERIALS AND METHODS: Wild-type and genetically modified NK-92 cell lines expressing a tyrosinase-specific TCR in the presence or absence of CD3ζ overexpression were analyzed. Bulk RNA sequencing was followed by differential gene-expression analysis, hierarchical clustering, multidimensional scaling, and pathway enrichment analysis. CD28 surface expression was assessed by flow cytometry, and activation-associated signaling responses were evaluated by western blotting after CD3/CD28 stimulation.
RESULTS: CD3ζ-overexpressing NK-92 cells formed distinct transcriptomic clusters and displayed broader gene expression changes. Expression of CD3δγε alone or in combination with tyrosinase-specific TCR resulted in comparatively limited transcriptional divergence from the empty-vector control, whereas CD3ζ inclusion shifted enriched pathways toward lymphocyte activation, cytotoxicity, and PI3K-AKT-related signaling. CD3ζ- overexpressing cells also exhibited increased CD28 surface expression and altered phosphorylation patterns, most notably involving AKT in response to CD3/CD28 stimulation.
CONCLUSION: CD3ζ overexpression is not a neutral modification in TCR-NK cell engineering. It is associated with broad transcriptional remodeling and activation-associated signaling changes that may provide a molecular context for the previously observed increase in non-specific activity. These findings support TCR-NK engineering strategies that preserve endogenous CD3ζ regulation while introducing only the missing CD3δγε components required for functional TCR expression.
论文信息
- 作者
- Sütlü T、Çelik E、Çakıcı B、Özarı S、Aras M
- 第一作者单位
- Acıbadem University Faculty of Engineering and Natural Sciences, Department of Molecular Biology and Genetics, İstanbul, Türkiye.Turkey
- 通讯作者单位
- Türkiye Cancer Institute, Health Institutes of Türkiye, Ankara, Türkiye.Turkey
- 期刊
- Turkish journal of haematology : official journal of Turkish Society of Haematology2026 Sep 8