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AI 驱动的乳腺癌 CRISPR 策略:类器官建模、适应性编辑与精准递送

英文原题:AI-driven CRISPR strategies in breast cancer: Organoid modeling, adaptive editing, and precision delivery.

查看英文原题

AI-driven CRISPR strategies in breast cancer: Organoid modeling, adaptive editing, and precision delivery.

PubMed 2026/01/01(内容时间) Iran J Basic Med Sci Q2 · IF 3.2(JCR 2025)

研究概要

三阴性乳腺癌(TNBC)的定义是高度异质性、休眠的转移储库和快速的治疗耐药。

中文摘要

三阴性乳腺癌(TNBC)以显著异质性、休眠转移储库和快速治疗耐药为特征。在我们的人工智能驱动乳腺癌CRISPR策略框架基础上,CRISPR-Cas9正崛起为不仅仅是基因编辑工具,还能够恢复昼夜节律完整性、消除休眠克隆并重编程免疫监视。通过2025年之前对PubMed、Scopus和ClinicalTrials.gov的结构化综述,整合了机制、临床前和早期临床证据。除标准敲除、碱基编辑和先导编辑外,我们重点介绍了BMAL1/PER2的时辰基因组修复、聚焦休眠的合成致死筛选,以及针对BRCA1缺陷肿瘤的基因组崩溃策略。还评估了迭代优化guide RNA和外泌体模拟载体的自适应AI流程,整合布尔逻辑门,以实现自我调节、肿瘤特异性递送。概念验证研究显示,HER2缺失、TP53恢复和ABCB1沉默可增强luminal、HER2阳性和TNBC模型的化疗敏感性。昼夜节律恢复扩大了治疗窗口并延迟了异种移植瘤的复发。针对休眠的CRISPR筛选揭示了播散性肿瘤细胞的独特脆弱性,而基因组崩溃选择性破坏BRCA1突变克隆。与CAR-T细胞和抗体-药物偶联物的整合放大了细胞毒性,瞬时纳米颗粒或外泌体系统改善了实体瘤穿透,同时最小化脱靶事件。CRISPR-Cas9正从分子手术刀转变为自适应、自学习的治疗生态系统。通过将AI引导设计、昼夜节律重编程、休眠根除和逻辑门控递送相结合,本文详述的策略定义了一种下一代精准肿瘤学范式,能够预测肿瘤演化、克服耐药性并预防转移性复发。

展开英文摘要原文

Triple-negative breast cancer (TNBC) is defined by profound heterogeneity, dormant metastatic reservoirs, and rapid therapy resistance. Building on our AI-Driven CRISPR Strategies in Breast Cancer framework, CRISPR-Cas9 is emerging as more than a gene-editing tool, capable of restoring circadian integrity, eliminating dormant clones, and re-programming immune surveillance. A structured PubMed, Scopus, and ClinicalTrials.gov review through 2025 integrated mechanistic, preclinical, and early clinical evidence. Beyond standard knockout, base, and prime editing, we highlight chrono-genomic repair of BMAL1/PER2, dormancy-focused synthetic-lethality screens, and genomic-collapse tactics for BRCA1-deficient tumors. Adaptive AI pipelines that iteratively refine guide RNAs and exosome-mimetic carriers, incorporating Boolean logic gates, were also evaluated for self-regulated, tumor-specific delivery. Proof-of-concept studies show that HER2 deletion, TP53 rescue, and ABCB1 silencing enhance chemosensitivity across luminal, HER2-positive, and TNBC models. Circadian restoration expands therapeutic windows and delays relapse in xenografts. Dormancy-directed CRISPR screens reveal unique vulnerabilities in disseminated tumor cells, whereas genomic collapse selectively destroys BRCA1-mutant clones. Integration with CAR-T cells and antibody-drug conjugates amplifies cytotoxicity, and transient nanoparticle or exosome systems improve solid-tumor penetration while minimizing off-target events. CRISPR-Cas9 is transitioning from a molecular scalpel to an adaptive, self-learning therapeutic ecosystem. By uniting AI-guided design, circadian reprogramming, dormancy eradication, and logic-gated delivery, the strategies detailed here define a next-generation precision-oncology paradigm capable of anticipating tumor evolution, overcoming resistance, and preventing metastatic relapse.

论文信息

作者
Taki AG、Shareef A、Arora V、Oweis R、Jyothi SR、Singh U、Sahoo S、Chauhan AS
第一作者单位
Department of Radiology Techniques, Health and Medical Techniques College, Alnoor University, Nineveh, Iraq.
通讯作者单位
Pharmacy College, Al-Farahidi University, Baghdad, Iraq.
文献类型
综述
期刊
Iranian journal of basic medical sciences2026
原文标识
PubMed 42610144 · DOI 10.22038/ijbms.2026.90248.19456