研究概要
本研究建立了基于TIL的NSCLC预后风险模型,并确定HLA-DRA、NPC2和PRPF38 B为具有肿瘤抑制功能的潜在免疫调节治疗靶点,为NSCLC精准免疫治疗提供了新见解。
研究思路结论见上方概要
背景
非小细胞肺癌(NSCLC)是最常见的肺癌亚型,也是癌症相关死亡的主要原因,因为早期无症状且5年生存率低,而TIL(肿瘤浸润淋巴细胞)(TILs)在肿瘤微环境(TME)中对NSCLC进展和预后起着关键但尚不明确的作用。
方法
我们分析了来自GEO(GSE148466)的单细胞RNA测序数据、来自TCGA的NSCLC相关数据以及来自GEO(GSE50081)的基因表达数据。使用LASSO回归构建了一个9基因TIL相关风险评分模型(HLA-DRA、NPC2、PRPF38B、PABPC1、ENO1、ANXA2、LGALS1、S100A10、SRGN),并通过Kaplan-Meier和ROC分析及外部验证评估其预后价值。使用TISIDB分析免疫浸润和调控因子,通过GSVA和GSEA分析通路关联,并使用RT-qPCR、Western blotting和共培养实验验证关键基因(HLA-DRA、NPC2、PRPF38B)的功能作用。
结果
TIL在吸烟和非吸烟NSCLC样本中均丰富存在。9基因风险模型有效地根据生存对患者进行分层,高风险患者表现出更差的结局以及富集的促肿瘤免疫特征和通路。高风险评分与M0巨噬细胞增加、活化NK细胞以及免疫检查点升高相关。HLA-DRA、NPC2和PRPF38 B的过表达抑制了NSCLC细胞增殖、迁移和侵袭,同时增强凋亡并抑制M2巨噬细胞极化。
展开英文摘要原文
BACKGROUND: Non-small cell lung cancer (NSCLC) is the most common lung cancer subtype and a leading cause of cancer-related mortality due to asymptomatic early stages and poor 5-year survival, and tumor-infiltrating lymphocytes (TILs) play a pivotal but poorly defined role in NSCLC progression and prognosis within the tumor microenvironment (TME).
METHODS: We analyzed single-cell RNA sequencing data from GEO (GSE148466), NSCLC-related data from TCGA, and gene expression data from GEO (GSE50081). A 9-gene TIL-related risk score model (HLA-DRA, NPC2, PRPF38B, PABPC1, ENO1, ANXA2, LGALS1, S100A10, SRGN) was constructed using LASSO regression, with its prognostic value assessed via Kaplan-Meier and ROC analyses and external validation. Immune infiltration and regulatory factors were analyzed using TISIDB, pathway associations via GSVA and GSEA, and functional roles of key genes (HLA-DRA, NPC2, PRPF38 B) validated using RT-qPCR, Western blotting, and co-culture assays.
RESULTS: TILs were abundant in both smoking and non-smoking NSCLC samples. The 9-gene risk model effectively stratified patients by survival, with high-risk patients showing poorer outcomes and enriched tumor-promoting immune features and pathways. High-risk scores were associated with increased M0 macrophages, activated NK cells, and elevated immune checkpoints. Overexpression of HLA-DRA, NPC2, and PRPF38 B inhibited NSCLC cell proliferation, migration, and invasion, while enhancing apoptosis and suppressing M2 macrophage polarization.
CONCLUSION: This study establishes a TIL-based prognostic risk model for NSCLC and identifies HLA-DRA, NPC2, and PRPF38 B as potential immune-regulatory therapeutic targets with tumor-suppressive functions, providing new insights for NSCLC precision immunotherapy.
论文信息
- 作者
- Su W、Wu Y、He Q、Zhou L、Zhou J
- 单位
- Department of Respiratory and Critical Care Medicine, The Third Affiliated Hospital of Soochow University, The First People's Hospital of Changzhou, Changzhou, Jiangsu Province, China.China
- 期刊
- Frontiers in cell and developmental biology2026