← 返回前沿论文

通过计算机模拟-体外工作流程发现靶向 KRAS G12D 新抗原的 TCR 样抗体

英文原题:Discovery of TCR-like antibodies to the KRAS G12D neoantigen via in silico-in vitro workflow.

查看英文原题

Discovery of TCR-like antibodies to the KRAS G12D neoantigen via in silico-in vitro workflow.

PubMed 2026/06/03(内容时间) Mol Ther Q1 · IF 11.4(JCR 2025)

研究概要

这些发现共同确立了一条用于 T 细胞受体(TCR)样抗体发现的实用型设计到功能流程,并证明了治疗性靶向 KRAS G12D 驱动恶性肿瘤的可行性。

中文摘要

识别肽负载的 I 类主要组织相容性复合体(MHC)分子的抗体,有望实现对细胞内致癌蛋白的治疗性靶向;然而,肽抗原体积小且需要等位基因特异性识别,使这类抗体的发现颇具挑战。本文介绍一种整合计算机模拟与体外实验的工作流程,用于生成针对由人白细胞抗原(HLA)-C*08:02呈递的 KRAS G12D 10(经临床验证的肿瘤新抗原)的高亲和力、高选择性抗体。在计算机模拟阶段,先生成多个能够与靶标实现最佳对接的人源抗体可变区片段,再对互补决定区(CDR)进行有限的序列设计。在体外阶段,将有限的 CDR 多样性引入酵母表面展示文库,并进行迭代筛选。该流程获得了对 KRAS G12D 10/HLA-C*08:02具有高亲和力的特异性抗体。利用噬菌体展示文库进行的全面特异性分析证实,这些抗体不与人源非靶标发生交叉反应;计算机分析还预测其免疫原性较低。将其改造成嵌合抗原受体或双特异性 T 细胞衔接器后,这些抗体可介导对靶标阳性细胞的选择性细胞毒作用。综上,本研究建立了一个从设计到功能验证的 T 细胞受体(TCR)样抗体发现实用流程,并证明了针对 KRAS G12D 驱动肿瘤进行治疗性靶向的可行性。

展开英文摘要原文

Antibodies that recognize peptide-loaded class I major histocompatibility complex (MHC) molecules could enable therapeutic targeting of intracellular oncogenic proteins, yet their discovery has been hampered by the small size of peptide antigens and the need for allele-specific recognition. Here, we describe an integrated in silico-in vitro workflow for generating high-affinity, selective antibodies to Kirsten rat sarcoma viral oncogene homolog (KRAS) G12D 10 presented by human leukocyte antigen (HLA)-C 08:02, a clinically validated cancer neoantigen. In the in silico stage, multiple human antibody-derived variable fragments optimally docked to the target were generated, followed by limited sequence design of complementarity-determining regions (CDRs). In the in vitro stage, limited CDR diversity was introduced to construct a yeast surface-displayed library, which was subjected to iterative selection. This workflow yielded KRAS G12D 10 /HLA-C 08:02-specific antibodies with high affinity. Comprehensive specificity profiling using a phage display library confirmed the absence of human off-target reactivity, and in silico analysis predicted low immunogenicity. When reformatted as chimeric antigen receptors or bispecific T cell engagers, these antibodies mediated selective cytotoxicity against target-positive cells. Together, these findings establish a practical design-to-function pipeline for T cell receptor (TCR)-like antibody discovery and demonstrate the feasibility of therapeutically targeting KRAS G12D-driven malignancies.

论文信息

作者
Ahn S、Oh TS、Suh S、Jeon JY、Lah S、Ryu K、Choi S、Kim H
第一作者单位
TheraZyne, Inc., Daejeon 34051, Republic of Korea.South Korea
通讯作者单位
TheraZyne, Inc., Daejeon 34051, Republic of Korea. Electronic address: jbs@therazyne.com.South Korea
期刊
Molecular therapy : the journal of the American Society of Gene Therapy2026 Sep 2
原文标识
PubMed 42237541 · DOI 10.1016/j.ymthe.2026.05.032