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脑转移灶与原发性乳腺癌样本的特征分析、免疫细胞表型分析及差异基因表达分析

英文原题:Characterization, immune cell phenotyping and differential gene expression analysis of brain metastases and primary breast cancer samples.

PubMed 2026/03/29(内容时间) Sci Rep Q1 · IF 4.9(JCR 2025)

研究概要

我们的研究揭示了原发性乳腺肿瘤与脑转移瘤之间的分子和免疫学差异。

中文摘要

乳腺癌的肿瘤异质性已得到广泛认可,但研究主要集中于原发肿瘤,而转移灶,尤其是脑转移(BM),仍研究不足。随着转移性乳腺癌(MBC)中脑转移发病率的上升及其预后不良,深入理解驱动脑转移形成、进展及免疫逃逸的分子机制对于制定更优治疗策略至关重要。我们采用免疫组织化学、原位杂交、TIL(肿瘤浸润淋巴细胞)定量及批量RNA测序,对脑转移及配对的原发乳腺肿瘤进行了整合分析。在十例配对样本患者中,分析了肿瘤受体状态、基因表达谱、免疫细胞组成及通路改变。原发肿瘤与脑转移之间观察到受体状态的变化,包括雌激素受体和HER2表达的改变。RNA测序揭示了差异表达基因和通路,其中脑转移中免疫相关基因明显下调。免疫谱分析提示肿瘤微环境发生转变,脑转移显示B细胞和CD8+ T细胞浸润减少,而M2巨噬细胞和滤泡辅助T细胞相对增加。尽管这些发现为描述性且受样本量限制,但它们指向脑转移中可能更具免疫抑制性的微环境,这可能有助于免疫逃逸并降低对检查点抑制剂治疗的反应性。我们的研究强调了原发乳腺肿瘤与脑转移之间的分子和免疫学差异。脑转移中改变的免疫景观,以TIL浸润减少和免疫抑制细胞增加为特征,值得在更大、更同质化的队列中进一步研究。

展开英文摘要原文

Tumor heterogeneity in breast cancer is well recognized, but research has largely focused on primary tumors, while metastatic lesions, particularly brain metastases (BM), remain understudied. With the rising incidence of BM in metastatic breast cancer (MBC) and their poor prognosis, a deeper understanding of the molecular mechanisms driving BM formation, progression, and immune evasion is crucial for developing better therapeutic strategies. We performed an integrated analysis of BM and matched primary breast tumors using immunohistochemistry, in-situ hybridization, tumor-infiltrating lymphocyte (TIL) quantification, and bulk RNA sequencing. Tumor receptor status, gene expression profiles, immune cell composition, and pathway alterations were analyzed in ten patients with paired samples. Changes in receptor status were observed between primary tumors and BM, including alterations in estrogen receptor and HER2 expression. RNA sequencing revealed differentially expressed genes and pathways, with an apparent downregulation of immune-related genes in BM. Immune profiling suggested a shift in the tumor microenvironment, with BM showing lower B- and CD8 + T-cell infiltration and a relative increase in M2 macrophages and follicular helper T-cells. While these findings are descriptive and limited by sample size, they point towards a potentially more immunosuppressive milieu in BM that may contribute to immune evasion and reduced responsiveness to checkpoint inhibitor therapy. Our study highlights molecular and immunological differences between primary breast tumors and BM. The altered immune landscape in BM, characterized by diminished TIL infiltration and an increase in immunosuppressive cells, warrants further investigation in larger, more homogeneous cohorts.

论文信息

作者
Gassner FJ、Rinnerthaler G、Castagnaviz V、Gonzalez-Martinez A、Parigger T、Drothler S、Greil R、Geisberger R
第一作者单位
Cancer Research Laboratory of the Department of Internal Medicine III, University Hospital Salzburg, Paracelsus Medical University Salzburg, Müllner Hauptstraße 48, Salzburg, 5020, Austria.Austria
通讯作者单位
Cancer Research Laboratory of the Department of Internal Medicine III, University Hospital Salzburg, Paracelsus Medical University Salzburg, Müllner Hauptstraße 48, Salzburg, 5020, Austria. s.gampenrieder@salk.at.Austria
期刊
Scientific reports2026 Mar 29
原文标识
PubMed 41905976 · DOI 10.1038/s41598-026-45607-w