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基线 PBMC 的单细胞 RNA 测序可预测 NSCLC 患者的 ICI 疗效和 irAE 严重程度

英文原题:Single-cell RNA sequencing of baseline PBMCs predicts ICI efficacy and irAE severity in patients with NSCLC.

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Single-cell RNA sequencing of baseline PBMCs predicts ICI efficacy and irAE severity in patients with NSCLC.

PubMed 2025/05/22(内容时间) J Immunother Cancer Q1 · IF 11.7(JCR 2025)

研究概要

本研究通过治疗前的PBMC样本,识别了与ICI预后和irAE严重程度相关的生物学通路及关键生物标志物。这些发现为改进治疗策略奠定了基础,从而在提高临床疗效的同时最大限度降低ICI治疗相关风险。

研究思路结论见上方概要

免疫检查点抑制剂(ICIs)已经改变了治疗格局,并为晚期非小细胞肺癌(NSCLC)患者提供了显著的临床获益和持久缓解。然而,只有一小部分患者对ICI治疗有应答,且导致治疗中断的免疫相关不良事件(irAEs)仍然具有挑战性。尽管人们认识到需要生物标志物来预测ICIs的疗效和irAEs的风险,但此类生物标志物尚未被明确识别。

在本研究中,我们对33例NSCLC患者ICIs治疗前的外周血单个核细胞(PBMCs)进行了单细胞RNA测序(scRNA-seq)。为验证我们的发现,我们重新分析了公开的scRNA-seq数据,进行了细胞珠阵列(CBA)检测,并通过T细胞受体测序支持我们的发现。

虽然免疫反应在预后良好的患者中更为明显,但缺氧通路在原发耐药患者中更为突出。CD8 T细胞、CD4 T细胞和NK 细胞等淋巴细胞主要参与这些通路,其中PRF1和GZMB的表达与良好预后显示出强关联。相比之下,irAEs主要与髓系细胞相关,如单核细胞和巨噬细胞。随着irAE严重程度的增加,炎症和TNF-NFKB1通路更为突出。具体而言,单核细胞中IL1B、CXCL8和CXCL2表达的增加以及巨噬细胞中TNF表达的增加,通过参与这些通路与严重irAE密切相关。值得注意的是,PRF1和GZMB表达的增加与良好预后和irAE严重程度降低均显示出密切关联,这通过CBA分析得到了验证。此外,无论患者背景如何,如programmed death-ligand 1表达水平、肿瘤组织学或既往治疗方案,这些关键标志物的表达均随预后和irAE严重程度而变化。

展开英文摘要原文

BACKGROUND: Immune checkpoint inhibitors (ICIs) have transformed treatment and have provided significant clinical benefits and durable responses for patients with advanced non-small cell lung cancer (NSCLC). However, only a small percentage of patients respond to ICI treatment, and immune-related adverse events (irAEs) leading to treatment discontinuation remain challenging. Despite the recognized need for biomarkers to predict both the efficacy of ICIs and the risk of irAEs, such biomarkers are yet to be clearly identified. METHODS: In this study, we performed single-cell RNA sequencing (scRNA-seq) of peripheral blood mononuclear cells (PBMCs) from 33 patients with NSCLC before ICIs treatment. To validate our findings, we reanalyzed public scRNA-seq data, conducted a cytometric bead array (CBA), and supported our findings with T-cell receptor sequencing. RESULTS: While the immune response was more pronounced in patients with a favorable prognosis, the hypoxic pathway was more prominent in patients with primary resistance. Lymphocytes such as CD8 T cells, CD4 T cells, and natural killer cells were primarily involved in these pathways, with PRF1 and GZMB expression showing strong associations with favorable prognosis. In contrast, irAEs were mainly linked to myeloid cells, such as monocytes and macrophages. As irAE severity increased, inflammation and the TNF-NFKB1 pathway were more prominent. Specifically, increased expression of IL1B , CXCL8 , and CXCL2 in monocytes and TNF in macrophages was closely associated with severe irAE through involvement in these pathways.Notably, the increase of PRF1 and GZMB expression showed a close association with both a favorable prognosis and a reduced severity of irAE, which was validated through CBA analysis. Moreover, the expression of these key markers varied according to prognosis and irAE severity regardless of patient background, such as programmed death-ligand 1 expression levels, tumor histology, or prior treatment regimens. CONCLUSIONS: This study identified biological pathways and key biomarkers associated with ICI prognosis and irAE severity using PBMC samples before treatment. These findings provide a foundation for improved therapeutic strategies that enhance clinical outcomes while minimizing ICI treatment-associated risks.

论文信息

作者
Kim GD、Shin SI、Sun P、Lee JE、Chung C、Kang YE、Kang DH、Park J
第一作者单位
Life Science, Gwangju Institute of Science and Technology, Gwangju, Buk-gu, Korea (the Republic of).South Korea
通讯作者单位
Life Science, Gwangju Institute of Science and Technology, Gwangju, Buk-gu, Korea (the Republic of) jihwan.park@gist.ac.kr ibelieveu113@naver.com.South Korea
期刊
Journal for immunotherapy of cancer2025 May 22
原文标识
PubMed 40404203 · DOI 10.1136/jitc-2025-011636