下一代肿瘤不可知靶点即将出现
Next-generation tumor-agnostic targets on the horizon.
肿瘤不可知药物开发将肿瘤学重新聚焦于共享的分子依赖性而非组织来源,从而能够针对跨肿瘤的罕见可操作驱动因素进行高效开发。
英文原题:Aberrant expression of collagen type X in solid tumor stroma is associated with EMT, immunosuppressive and pro-metastatic pathways, bone marrow stromal cell signatures, and poor survival prognosis.
COL10A1相关基因网络作为侵袭性肿瘤表型的调控因子和生物标志物可能具有重要价值,对治疗开发和临床结局具有重要意义。识别COL10A1及其相关基因高表达的肿瘤,可能揭示具有增强EMT能力和转移潜能的骨髓来源基质微环境的存在。我们的分析可能有助于对乳腺癌和胰腺癌患者进行更有效的风险评估和更精准的治疗。
X型胶原(ColXα1,由COL10A1编码)特异性表达于软骨-骨转换区、骨髓细胞以及骨关节炎(OA)软骨中。我们此前已表明,ColXα1在乳腺肿瘤基质中表达,与TIL(肿瘤浸润淋巴细胞)相关,并预测ER+/HER2+乳腺癌辅助治疗的不良结局。然而,这些效应的潜在分子机制尚不清楚。在本研究中,我们对乳腺癌和胰腺癌以及来自骨髓和OA软骨的细胞中COL10A1相关基因模块进行了生物信息学分析。这些发现为影响局部基质微环境和肿瘤进展的转录及细胞外基质变化机制提供了重要见解。
采用免疫组织化学方法检测实体瘤中X型胶原的表达。利用癌症基因组图谱的RNA-Seq数据,通过WGCNA在乳腺和胰腺肿瘤队列中构建COL10A1相关基因网络。采用计算分析评估这些基因网络对癌症和OA发生发展的影响。数据处理和统计分析使用R及多种公开可用的计算工具完成。
COL10A1及其相关基因网络的表达凸显了炎症性和免疫抑制性微环境,这识别了侵袭性乳腺和胰腺肿瘤,并以性别依赖的方式促进转移潜能。这两种癌症类型均富含基质,COL10A1提示骨髓来源的成纤维细胞是这些肿瘤中上皮-间质转化(EMT)的贡献者。COL10A1及其相关基因网络的表达升高与乳腺癌和胰腺癌患者较差的预后相关。癌症与OA软骨之间共享常见的转录变化和软骨生成活性,提示相似的微环境改变可能是这两种疾病的基础。
BACKGROUND: Collagen type X (ColXα1, encoded by COL10A1) is expressed specifically in the cartilage-to-bone transition, in bone marrow cells, and in osteoarthritic (OA) cartilage. We have previously shown that ColXα1 is expressed in breast tumor stroma, correlates with tumor-infiltrating lymphocytes, and predicts poor adjuvant therapy outcomes in ER + /HER2 + breast cancer. However, the underlying molecular mechanisms for these effects are unknown. In this study, we performed bioinformatic analysis of COL10A1-associated gene modules in breast and pancreatic cancer as well as in cells from bone marrow and OA cartilage. These findings provide important insights into the mechanisms of transcriptional and extracellular matrix changes which impact the local stromal microenvironment and tumor progression. METHODS: Immunohistochemistry was performed to examine collagen type X expression in solid tumors. WGCNA was used to generate COL10A1-associated gene networks in breast and pancreatic tumor cohorts using RNA-Seq data from The Cancer Genome Atlas. Computational analysis was employed to assess the impact of these gene networks on development and progression of cancer and OA. Data processing and statistical analysis was performed using R and various publicly-available computational tools. RESULTS: Expression of COL10A1 and its associated gene networks highlights inflammatory and immunosuppressive microenvironments, which identify aggressive breast and pancreatic tumors and contribute to metastatic potential in a sex-dependent manner. Both cancer types are enriched in stroma, and COL10A1 implicates bone marrow-derived fibroblasts as contributors to the epithelial-to-mesenchymal transition (EMT) in these tumors. Heightened expression of COL10A1 and its associated gene networks is correlated with poorer patient outcomes in both breast and pancreatic cancer. Common transcriptional changes and chondrogenic activity are shared between cancer and OA cartilage, suggesting that similar microenvironmental alterations may underlie both diseases. CONCLUSIONS: COL10A1-associated gene networks may hold substantial value as regulators and biomarkers of aggressive tumor phenotypes with implications for therapy development and clinical outcomes. Identification of tumors which exhibit high expression of COL10A1 and its associated genes may reveal the presence of bone marrow-derived stromal microenvironments with heightened EMT capacity and metastatic potential. Our analysis may enable more effective risk assessment and more precise treatment of patients with breast and pancreatic cancer.
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