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免疫调节基因影响热/冷肿瘤微环境,进而影响癌症治疗和患者预后

英文原题:Immune regulatory genes impact the hot/cold tumor microenvironment, affecting cancer treatment and patient outcomes.

PubMed 2025/01/22(内容时间) Front Immunol Q1 · IF 7(JCR 2025)

研究概要

在本研究中,我们开发了一个框架,用于识别不同癌症类型中具有临床意义的免疫亚型,进一步确定了若干潜在靶点,可将冷肿瘤转化为热肿瘤,从而增强抗癌治疗疗效。

研究思路结论见上方概要

免疫学热肿瘤以炎症性肿瘤微环境(TME)为特征,与免疫学冷肿瘤形成显著对比。识别这些肿瘤免疫亚型具有临床意义,因为热肿瘤可能表现出更好的预后和对检查点阻断治疗的更高反应性。然而,目前对于热/冷肿瘤的临床相关定义尚未达成共识,免疫基因对热/冷肿瘤形成的影响也仍知之甚少。

从癌症基因组图谱数据库获取了33种不同类型癌症的数据,并使用CIBERSORT算法评估了其免疫组成。根据肿瘤不同的免疫组成、正在进行的免疫反应和总生存期,将其分为热肿瘤或冷肿瘤。创建了定制免疫图以识别重要的免疫学特征。通过基因集变异分析评估了京都基因与基因组百科全书和Hallmark通路富集。此外,还识别了调控肿瘤微环境的枢纽基因,并使用单细胞RNA测序分析了其表达模式。此外,进行了药物敏感性和分子对接分析,以识别能够将冷肿瘤转化为热肿瘤的潜在候选药物。为了验证,使用多重免疫组织化学检查了诊断为胰腺腺癌患者的临床队列。

我们能够通过分析CD8+ T细胞、活化的NK 细胞和M2型巨噬细胞的存在,以及细胞溶解活性和T细胞增殖,在各种类型的癌症(膀胱尿路上皮癌、胰腺腺癌和宫颈鳞状细胞癌)中区分热肿瘤和冷肿瘤。发现了调控TME的核心基因,包括PDCD1、CD276和NT5E。NT5E表达增加及其预后意义在胰腺腺癌中通过多重免疫组织化学得到证实。最后,达沙替尼和tozasertib被确定为能够将冷胰腺腺癌肿瘤转化为热肿瘤的候选药物。

展开英文摘要原文

BACKGROUND AND AIMS: Immunologically hot tumors, characterized by an inflamed tumor microenvironment (TME), contrast significantly with immunologically cold tumors. The identification of these tumor immune subtypes holds clinical significance, as hot tumors may exhibit improved prognoses and heightened responsiveness to checkpoint blockade therapy. Nevertheless, as yet there is no consensus regarding the clinically relevant definition of hot/cold tumors, and the influence of immune genes on the formation of hot/cold tumors remains poorly understood. METHODS: Data for 33 different types of cancer were obtained from The Cancer Genome Atlas database, and their immune composition was assessed using the CIBERSORT algorithm. Tumors were categorized as either hot or cold based on their distinct immune composition, ongoing immune response, and overall survival. A customized immunogram was created to identify important immunological characteristics. Kyoto Encyclopedia of Genes and Genomes and Hallmark pathway enrichment were evaluated through gene set variation analysis. Additionally, hub genes that regulate the tumor microenvironment were identified, and their expression patterns were analyzed using single-cell RNA sequencing. Furthermore, drug sensitivity and molecular docking analyses were performed to identify potential drug candidates capable of transforming cold tumors into hot tumors. For validation, a clinical cohort of patients diagnosed with pancreatic adenocarcinoma was examined using multiplex immunohistochemistry. RESULTS: We were able to differentiate between hot and cold tumors in various types of cancer (bladder urothelial carcinoma, pancreatic adenocarcinoma, and cervical squamous cell carcinoma) by analyzing the presence of CD8+ T cells, activated natural killer cells, and M2-type macrophages, as well as the cytolytic activity and T cell proliferation. Hub genes that regulate the TME, including PDCD1 , CD276 , and NT5E , were discovered. The increased expression of NT5E and its prognostic significance were confirmed through multiplex immunohistochemistry in pancreatic adenocarcinoma. Finally, dasatinib and tozasertib were identified as drug candidates capable of converting cold pancreatic adenocarcinoma tumors into hot tumors. CONCLUSION: In this study, we developed a framework for discerning clinically significant immune subtypes across various cancer types, further identifying several potential targets for converting cold tumors into hot tumors to enhance anticancer treatment efficacy.

论文信息

作者
Sang M、Ge J、Ge J、Tang G、Wang Q、Wu J、Mao L、Ding X
单位
Department of Immunology, School of Medicine, Nantong University, Nantong, China.China
文献类型
非美国政府资助研究
期刊
Frontiers in immunology2024
原文标识
PubMed 39911580 · DOI 10.3389/fimmu.2024.1382842