研究概要
在此,我们整合了两个单细胞RNA测序数据集,涵盖29个样本和近300,000个免疫细胞,以探究肿瘤进展和淋巴结转移过程中的免疫细胞动态。
中文摘要
头颈部鳞状细胞癌(HNSCC)是全球第六大常见癌症。HPV阴性HNSCC起源于上气道黏膜,尤其具有侵袭性,近半数患者在五年内死于该病,且与其他癌症相比对免疫检查点抑制剂反应有限。有必要进一步探索HPV阴性HNSCC中复杂的免疫景观,以识别潜在的治疗靶点。在此,我们整合了两个单细胞RNA测序数据集,涵盖29个样本和近300,000个免疫细胞,以研究免疫细胞在肿瘤进展和淋巴结转移中的动态变化。考虑到疾病分期,在14种不同的HNSCC相关外周血单核细胞(PBMCs)和21种肿瘤浸润免疫细胞(TICs)中观察到向适应性免疫细胞群体的显著转变。所有PBMCs和TICs均揭示了与淋巴结受累相关的独特分子特征;然而,总体而言,TICs在效应细胞因子、生长因子和干扰素相关基因中配体表达增加。比较PBMCs和TICs的通路分析进一步证实了单核细胞-巨噬细胞、树突状细胞、自然杀伤(NK)细胞和T细胞群体之间的活跃细胞信号传导。受体-配体分析揭示了TICs中、CD8+ T细胞与NK细胞之间显著的通讯模式转变,显示出与疾病进展相关的免疫抑制信号增强。在局部侵袭性HPV阴性HNSCC样本中,高度多重免疫荧光检测突出了耗竭CD8+ T细胞和NK细胞在瘤周的聚集,以及它们从瘤内微环境中的排除。这些发现强调细胞毒性免疫细胞作为有价值的生物标志物和治疗靶点,揭示了HNSCC持续逃避免疫反应的机制。
展开英文摘要原文
Head and neck squamous cell carcinoma (HNSCC) is the sixth most common cancer worldwide. HPV-negative HNSCC, which arises in the upper airway mucosa, is particularly aggressive, with nearly half of patients succumbing to the disease within five years and limited response to immune checkpoint inhibitors compared to other cancers. There is a need to further explore the complex immune landscape in HPV-negative HNSCC to identify potential therapeutic targets. Here, we integrated two single-cell RNA sequencing datasets from 29 samples and nearly 300,000 immune cells to investigate immune cell dynamics across tumor progression and lymph node metastasis. Notable shifts toward adaptative immune cell populations were observed in the 14 distinct HNSCC-associated peripheral blood mononuclear (PBMCs) and 21 tumor-infiltrating immune cells (TICs) considering disease stages. All PBMCs and TICs revealed unique molecular signatures correlating with lymph node involvement; however, broadly, TICs increased ligand expression among effector cytokines, growth factors, and interferon-related genes. Pathway analysis comparing PBMCs and TICs further confirmed active cell signaling among Monocyte-Macrophage, Dendritic cell, Natural Killer (NK), and T cell populations. Receptor-ligand analysis revealed significant communication patterns shifts among TICs, between CD8+ T cells and NK cells, showing heightened immunosuppressive signaling that correlated with disease progression. In locally invasive HPV-negative HNSCC samples, highly multiplexed immunofluorescence assays highlighted peri-tumoral clustering of exhausted CD8+ T and NK cells, alongside their exclusion from intra-tumoral niches. These findings emphasize cytotoxic immune cells as valuable biomarkers and therapeutic targets, shedding light on the mechanisms by which the HNSCC sustainably evades immune responses.
论文信息
- 作者
- Galvani RGA、Rojas A、Matuck BF、Rupp BT、Kumar N、Huynh K、de Biagi CAO、Liu J
- 单位
- Albert Einstein Research and Education Institute, Hospital Israelita Albert Einstein, Brazil.Israel
- 文献类型
- 预印本
- 期刊
- bioRxiv : the preprint server for biology2025 Jan 19