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单细胞分析揭示了年轻与老年患者之间免疫特征的差异

英文原题:Single-cell analysis reveals the disparities in immune profiles between younger and elder patients.

PubMed 2024/09/08(内容时间) Eur Geriatr Med Q2 · IF 3.9(JCR 2025)

研究概要

本研究揭示了年轻与老年NSCLC患者之间不同的免疫特征,与年轻患者相比,老年患者可能表现出更为免疫抑制的TME和减弱的肿瘤杀伤能力。

研究思路结论见上方概要

老年非小细胞肺癌(NSCLC)患者的免疫特征与年轻患者存在显著差异。肿瘤微环境(TME)是癌症进展和治疗反应的关键因素。本研究旨在揭示年轻和老年肺癌患者之间TME的差异。

我们从公共数据库下载了单细胞RNA数据。应用均匀流形近似和投影(UMAP)算法对单细胞测序数据进行聚类和可视化。进行基因集变异分析(GSVA)和基因集富集分析(GSEA)以评估亚组细胞的生理功能特征。使用CellPhoneDB识别TME内免疫细胞之间的细胞-细胞相互作用。

我们对老年患者的96,491个细胞和年轻患者的169,207个细胞分别进行了单细胞RNA测序。我们观察到,年轻患者TME的主要成分是上皮细胞,而老年患者TME的主要细胞类型是T/NK细胞。我们还发现,与年轻患者相比,老年患者中Tregs比例较高,NK、效应CD8+T和γδT细胞比例较低。此外,对老年和年轻患者NK细胞的比较GSEA分析显示,老年患者NK细胞中帕金森病、阿尔茨海默病、错配修复和碱基切除修复通路上调,而NK 细胞介导的细胞毒性和同种异体移植排斥相关通路下调。此外,我们在老年患者中鉴定出肿瘤相关中性粒细胞(TANs),GSVA分析表明血管生成通路上调,而interferon_γ_response、inflammatory_response、TNFα_signaling_via_NFκB通路下调。重要的是,老年患者中补体C1q C链阳性(C1QC+)巨噬细胞、组织驻留巨噬细胞(TRM)、非经典单核细胞(NCM)、分泌型磷蛋白1阳性(SPP1+)巨噬细胞和经典单核细胞(CM)的促炎反应评分显著低于年轻患者。最后,细胞间通讯分析揭示了老年和年轻患者之间调控模式的差异,即老年患者中的CXCL13-ACKR4和CSF1-SIRPA配对,以及年轻患者中的CTLA4-CD86和TIGIT-NECTIN2配对。

展开英文摘要原文

PURPOSE: The immune profiles of elder patients with non-small cell lung cancer (NSCLC) differ significantly from those of younger patients. The tumor microenvironment (TME) is a crucial factor in cancer progression and therapeutic responses. The present study aims to decipher the difference in TME between younger and elderly patients with lung cancers. METHODS: We downloaded single-cell RNA data from public databases. The algorithm of uniform manifold approximation and projection (UMAP) was applied to cluster and visualize single-cell sequencing data. Gene set variation analysis (GSVA) and gene set enrichment analysis (GSEA) analysis were performed to evaluate the physiological functional characteristics in sub-group cells. CellPhoneDB was used to identify cell-cell interactions between immune cells within TME. RESULTS: We conducted single-cell RNA sequencing on 96,491 cells from elderly patients and 169,207 cells from younger patients, respectively. We observed that epithelial cells were the predominant component of the TME in younger patients, whereas T/NK cells were the predominant cell type in the TME of elderly patients. We also found that there was a higher proportion of Tregs and a lower proportion of NK, effector CD8 + T and γδT cells in elder patients compared with younger patients. In addition, a comparative GSEA analysis of NK cells between older and younger patients revealed that the pathways of Parkinson's disease, Alzheimer's disease, mismatch repair, and base excision repair were up-regulated in NK cells from elderly patients, while the pathways related to natural killer cell-mediated cytotoxicity and allograft rejection were downregulated. Furthermore, we identified tumor-associated neutrophils (TANs) in elder patients, and GSVA analysis demonstrated that the pathway of angiogenesis was upregulated, and the pathway of interferon_γ_response, inflammatory_response, TNFα_signaling_via_NFκB pathways were downregulated. Importantly, the pro-inflammatory response scores of complement C1q C chain positive (C1QC + ) macrophages, tissue-resident macrophages (TRM), non-classical monocytes (NCM), secreted phosphoprotein 1 positive (SPP1 + ) macrophages, and classical monocytes (CM) in elder patients were significantly lower compared to those in younger patients. Finally, cell-to-cell communication analyses unveiled the disparities in regulatory patterns between elder and younger patients, namely the pairs of CXCL13-ACKR4 and CSF1-SIRPA in elder patients and the pairs of CTLA4-CD86 and TIGIT-NECTIN2 in younger patients. CONCLUSION: This study reveals the distinct immune profiles between younger and elder NSCLC patients, and the elder patients were likely to exhibit a more immunosuppressive TME and attenuated tumor-killing capability compared with younger patients.

论文信息

作者
Dong H、Hu F、Hao B、Jin X、Zheng Q、Su Y
第一作者单位
Department of Pulmonary and Critical Care Medicine, Tongren Hospital, Shanghai Jiao Tong University School of Medicine, 1111 XianXia Road, Shanghai, 200336, China.Germany
通讯作者单位
Department of Pulmonary and Critical Care Medicine, Tongren Hospital, Shanghai Jiao Tong University School of Medicine, 1111 XianXia Road, Shanghai, 200336, China. SYL4828@shtrhospital.com.Germany
文献类型
非美国政府资助研究
期刊
European geriatric medicine2024 Oct
原文标识
PubMed 39244673 · DOI 10.1007/s41999-024-01032-8