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基于转录组学的儿童低级别胶质瘤免疫基质微环境特征研究

英文原题:Transcriptomics-based characterization of the immuno-stromal microenvironment in pediatric low-grade glioma.

查看英文原题

Transcriptomics-based characterization of the immuno-stromal microenvironment in pediatric low-grade glioma.

PubMed 2024/08/09(内容时间) Oncoimmunology Q1 · IF 6.2(JCR 2025)

研究概要

我们的工作表明,低级别和高级别胶质瘤可以通过其免疫细胞浸润来表征和区分。

中文摘要

免疫治疗选择在低级别胶质瘤中并不常见,尽管此类疗法可能对无法手术和侵袭性病例有益。了解低级别胶质瘤中的免疫细胞和基质细胞对此类方法高度相关,但仍需进一步改进。收集了已发表的400例低级别胶质瘤和193例高级别胶质瘤的基因表达数据,使用专为脑肿瘤设计的去卷积方法量化10种微环境细胞群。首先,我们研究了低级别和高级别胶质瘤微环境的一般差异。低级别和高级别肿瘤分别聚类在一起,并显示这些组内总体相似而组间存在明显差异,主要差异是高级别胶质瘤中成纤维细胞和T细胞浸润更高。在分析的实体中,神经节胶质瘤和多形性黄色星形细胞瘤呈现最高的总体免疫细胞浸润。对低级别胶质瘤的进一步分析呈现三种不同的免疫细胞浸润微环境特征,可分为T细胞/树突状细胞/NK 细胞主导、中性粒细胞/B细胞谱系/NK 细胞主导和单核细胞/血管/基质细胞主导的免疫集群。这些集群与肿瘤位置、年龄和组织学诊断相关,但与性别或无进展生存期无关。生存分析显示,预后可通过基因表达、临床数据以及两者的组合使用支持向量机进行预测,并揭示了血管标志物的负面预后相关性。总体而言,我们的工作表明低级别和高级别胶质瘤可通过其免疫细胞浸润进行表征和区分。低级别胶质瘤聚类为三种不同的免疫肿瘤微环境,这可能对即将进行的免疫治疗研究具有进一步意义。

展开英文摘要原文

Immunologic treatment options are uncommon in low-grade gliomas, although such therapies might be beneficial for inoperable and aggressive cases. Knowledge of the immune and stromal cells in low-grade gliomas is highly relevant for such approaches but still needs to be improved. Published gene-expression data from 400 low-grade gliomas and 193 high-grade gliomas were gathered to quantify 10 microenvironment cell populations with a deconvolution method designed explicitly for brain tumors. First, we investigated general differences in the microenvironment of low- and high-grade gliomas. Lower-grade and high-grade tumors cluster together, respectively, and show a general similarity within and distinct differences between these groups, the main difference being a higher infiltration of fibroblasts and T cells in high-grade gliomas. Among the analyzed entities, gangliogliomas and pleomorphic xanthoastrocytomas presented the highest overall immune cell infiltration. Further analyses of the low-grade gliomas presented three distinct microenvironmental signatures of immune cell infiltration, which can be divided into T-cell/dendritic/natural killer cell-, neutrophilic/B lineage/natural killer cell-, and monocytic/vascular/stromal-cell-dominated immune clusters. These clusters correlated with tumor location, age, and histological diagnosis but not with sex or progression-free survival. A survival analysis showed that the prognosis can be predicted from gene expression, clinical data, and a combination of both with a support vector machine and revealed the negative prognostic relevance of vascular markers. Overall, our work shows that low- and high-grade gliomas can be characterized and differentiated by their immune cell infiltration. Low-grade gliomas cluster into three distinct immunologic tumor microenvironments, which may be of further interest for upcoming immunotherapeutic research.

论文信息

作者
Körner M、Spohn M、Schüller U、Bockmayr M
单位
Department of Pediatric Hematology and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.Germany
文献类型
非美国政府资助研究
期刊
Oncoimmunology2024
原文标识
PubMed 39135890 · DOI 10.1080/2162402X.2024.2386789