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鉴定一种促蛋白合成型骨肉瘤亚型用于预测预后和治疗

英文原题:Identification of a pro-protein synthesis osteosarcoma subtype for predicting prognosis and treatment.

PubMed 2024/07/16(内容时间) Sci Rep Q1 · IF 4.9(JCR 2025)

研究概要

骨肉瘤(OS)是一种异质性恶性梭形细胞肿瘤,具有侵袭性且预后不良。

中文摘要

骨肉瘤(OS)是一种异质性恶性梭形细胞肿瘤,具有侵袭性强和预后差的特点。尽管手术联合化疗显著改善了患者的预后,但转移性或复发性OS患者的预后仍不理想。因此,亟需以新的视角审视OS的发生机制和治疗策略。在研究公共数据库中的单细胞RNA测序(scRNA-seq)数据后,我们基于肿瘤内异质性鉴定出七种OS亚克隆类型。随后,我们基于促蛋白合成骨肉瘤(PPS-OS)相关基因构建了预后模型。相关性分析表明,该预后模型在预测OS患者预后方面表现极佳。我们还证明了OS患者预后的独立危险因素为肿瘤原发部位、转移状态和风险评分。基于这些因素,构建了用于预测3年和5年生存率的列线图。之后,对肿瘤免疫微环境(TIME)的研究揭示了γδ T细胞和B细胞活化的重要作用。药物敏感性分析和免疫检查点分析确定了在OS中具有潜在应用价值的药物。最后,选择跳跃易位断点(JTB)基因进行实验验证。JTB沉默抑制了OS细胞的增殖、迁移和侵袭。因此,我们的研究表明PPS-OS相关基因促进OS的恶性进展,可作为OS的预后指标和治疗靶点。

展开英文摘要原文

Osteosarcoma (OS) is a heterogeneous malignant spindle cell tumor that is aggressive and has a poor prognosis. Although combining surgery and chemotherapy has significantly improved patient outcomes, the prognosis for OS patients with metastatic or recurrent OS has remained unsatisfactory. Therefore, it is imperative to gain a fresh perspective on OS development mechanisms and treatment strategies. After studying single-cell RNA sequencing (scRNA-seq) data in public databases, we identified seven OS subclonal types based on intra-tumor heterogeneity. Subsequently, we constructed a prognostic model based on pro-protein synthesis osteosarcoma (PPS-OS)-associated genes. Correlation analysis showed that the prognostic model performs extremely well in predicting OS patient prognosis. We also demonstrated that the independent risk factors for the prognosis of OS patients were tumor primary site, metastatic status, and risk score. Based on these factors, nomograms were constructed for predicting the 3- and 5-year survival rates. Afterward, the investigation of the tumor immune microenvironment (TIME) revealed the vital roles of γδ T-cell and B-cell activation. Drug sensitivity analysis and immune checkpoint analysis identified drugs that have potential application value in OS. Finally, the jumping translocation breakpoint (JTB) gene was selected for experimental validation. JTB silencing suppressed the proliferation, migration, and invasion of OS cells. Therefore, our research suggests that PPS-OS-related genes facilitate the malignant progression of OS and may be employed as prognostic indicators and therapeutic targets in OS.

论文信息

作者
Yi C、Liu J、Zhao S、Gong D、Xu B、Li A、Bian E、Tian D
第一作者单位
Department of Orthopaedics, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, China.China
通讯作者单位
Department of Orthopaedics, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, China. tiands1212@126.com.China
期刊
Scientific reports2024 Jul 16
原文标识
PubMed 39014082 · DOI 10.1038/s41598-024-67547-z