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空间分辨多组学单细胞分析揭示胰腺癌免疫功能障碍机制

英文原题:Spatially Resolved Multi-Omics Single-Cell Analyses Inform Mechanisms of Immune Dysfunction in Pancreatic Cancer.

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Spatially Resolved Multi-Omics Single-Cell Analyses Inform Mechanisms of Immune Dysfunction in Pancreatic Cancer.

PubMed 2023/05/30(内容时间) Gastroenterology Q1 · IF 29.7(JCR 2025)

研究概要

我们的研究揭示了PDAC中多层次的免疫功能障碍,并呈现了PDAC和肺腺癌免疫景观的整体视图,为PDAC的功能研究和治疗可及靶点的探索提供了全面的资源。

研究思路结论见上方概要

由于胰腺导管腺癌(PDAC)对治疗干预仍然难以奏效,包括对在其他实体恶性肿瘤中有效的免疫治疗反应不佳,因此迫切需要更细致地理解PDAC中的免疫微环境。我们旨在采用空间分辨的多模式单细胞方法,详细揭示PDAC中的免疫微环境。

我们应用单细胞RNA测序、空间转录组学、多重免疫组化和质谱流式技术,对未经治疗的PDAC肿瘤及匹配的癌旁正常胰腺组织以及体循环中的免疫区室进行了分析。我们确定了免疫特征的预后关联,并在单细胞水平上对PDAC和肺腺癌的免疫微环境进行了荟萃分析。

我们提供了PDAC中免疫景观的空间分辨精细图谱。我们证实了CD8 T细胞的耗竭表型以及髓系细胞的免疫抑制特征,并突出了在PDAC中可能被低估作用的免疫亚群,这些亚群与邻近正常区域内的免疫群体存在差异,尤其是终末耗竭并获得调节表型的CD4 T细胞亚群和自然杀伤T细胞。对PDAC和肺腺癌中免疫表型的差异分析揭示了PDAC中存在异常免疫抑制的亚型,以及独特的免疫检查点组成。

展开英文摘要原文

BACKGROUND & AIMS: As pancreatic ductal adenocarcinoma (PDAC) continues to be recalcitrant to therapeutic interventions, including poor response to immunotherapy, albeit effective in other solid malignancies, a more nuanced understanding of the immune microenvironment in PDAC is urgently needed. We aimed to unveil a detailed view of the immune micromilieu in PDAC using a spatially resolved multimodal single-cell approach. METHODS: We applied single-cell RNA sequencing, spatial transcriptomics, multiplex immunohistochemistry, and mass cytometry to profile the immune compartment in treatment-naïve PDAC tumors and matched adjacent normal pancreatic tissue, as well as in the systemic circulation. We determined prognostic associations of immune signatures and performed a meta-analysis of the immune microenvironment in PDAC and lung adenocarcinoma on single-cell level. RESULTS: We provided a spatially resolved fine map of the immune landscape in PDAC. We substantiated the exhausted phenotype of CD8 T cells and immunosuppressive features of myeloid cells, and highlighted immune subsets with potentially underappreciated roles in PDAC that diverged from immune populations within adjacent normal areas, particularly CD4 T cell subsets and natural killer T cells that are terminally exhausted and acquire a regulatory phenotype. Differential analysis of immune phenotypes in PDAC and lung adenocarcinoma revealed the presence of extraordinarily immunosuppressive subtypes in PDAC, along with a distinctive immune checkpoint composition. CONCLUSIONS: Our study sheds light on the multilayered immune dysfunction in PDAC and presents a holistic view of the immune landscape in PDAC and lung adenocarcinoma, providing a comprehensive resource for functional studies and the exploration of therapeutically actionable targets in PDAC.

论文信息

作者
Yousuf S、Qiu M、Voith von Voithenberg L、Hulkkonen J、Macinkovic I、Schulz AR、Hartmann D、Mueller F
第一作者单位
Department of Surgery, Heidelberg University Hospital, Heidelberg, Germany.Germany
通讯作者单位
Department of Surgery, Heidelberg University Hospital, Heidelberg, Germany. Electronic address: susanne.roth@med.uni-heidelberg.de.Germany
文献类型
荟萃分析 · 非美国政府资助研究
期刊
Gastroenterology2023 Oct
原文标识
PubMed 37263303 · DOI 10.1053/j.gastro.2023.05.036