单细胞追踪揭示黑色素瘤 TIL 治疗过程中肿瘤反应性 T 细胞的可塑性
Single-cell tracking reveals tumor-reactive T cell plasticity during melanoma TIL therapy.
TIL(肿瘤浸润淋巴细胞)过继细胞治疗可在转移性黑色素瘤中诱导持久缓解,然而在体外扩增过程中及回输后,调控肿瘤反应性T细胞命运的克隆和转录动态仍知之甚少。
英文原题:Signatures of recent activation identify a circulating T cell compartment containing tumor-specific antigen receptors with high avidity.
我们的研究结果表明,在外周血中循环的具有高保护能力的肿瘤反应性 TCR 的特征是近期激活的标志。
T细胞受体(TCR)亲和力被认为是肿瘤特异性T细胞时空命运和保护能力的主要决定因素。然而,在体内随时间和空间监测具有已知TCR亲和力的多克隆T细胞反应仍然具有挑战性。在此,我们在一个成熟的、简化论的临床前肿瘤模型和黑色素瘤患者中,研究了具有不同亲和力TCR的肿瘤新抗原特异性T细胞的命运和功能。为此,我们使用具有深入表征TCR的多克隆T细胞转移,结合流式细胞术表型分析,在接种MC38 OVA肿瘤的小鼠中进行研究。转移来自携带高亲和力TCR的逆转录基因小鼠的T细胞可获得最佳的肿瘤保护。出乎意料的是,我们发现高亲和力和低亲和力T细胞在肿瘤内丰度相似,并表现出一致的耗竭表型特征。在肿瘤外,高亲和力TCR T细胞通常并未过度代表,而是在具有中等PD-1蛋白表达的T细胞群体中选择性富集。对来自两名黑色素瘤患者的新抗原特异性T细胞进行单细胞测序,结合通过CRISPR-Cas9介导的原位TCR替换对已鉴定TCR进行转基因再表达,揭示高功能性TCR富集于具有近期激活RNA特征的T细胞中。此外,在130个表面蛋白候选物中,PD-1表面表达最一致地富集于功能性TCR中。总之,我们的研究结果表明,在外周血中循环的具有高保护能力的肿瘤反应性TCR以近期激活的特征为标志。
T cell receptor (TCR) avidity is assumed to be a major determinant of the spatiotemporal fate and protective capacity of tumor-specific T cells. However, monitoring polyclonal T cell responses with known TCR avidities in vivo over space and time remains challenging. Here, we investigated the fate and functionality of tumor neoantigen-specific T cells with TCRs of distinct avidities in a well-established, reductionist preclinical tumor model and human patients with melanoma. To this end, we used polyclonal T cell transfers with in-depth characterized TCRs together with flow cytometric phenotyping in mice inoculated with MC38 OVA tumors. Transfer of T cells from retrogenic mice harboring TCRs with high avidity resulted in best tumor protection. Unexpectedly, we found that both high- and low-avidity T cells are similarly abundant within the tumor and adopt concordant phenotypic signs of exhaustion. Outside the tumor, high-avidity TCR T cells were not generally overrepresented but, instead, selectively enriched in T cell populations with intermediate PD-1 protein expression. Single-cell sequencing of neoantigen-specific T cells from two patients with melanoma-combined with transgenic reexpression of identified TCRs by CRISPR-Cas9-mediated orthotopic TCR replacement-revealed high-functionality TCRs to be enriched in T cells with RNA signatures of recent activation. Furthermore, of 130 surface protein candidates, PD-1 surface expression was most consistently enriched in functional TCRs. Together, our findings show that tumor-reactive TCRs with high protective capacity circulating in peripheral blood are characterized by a signature of recent activation.
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