研究概要
癌症中异常的前体mRNA剪接会产生正常组织中罕见或缺失的蛋白质序列,为免疫治疗提供了丰富的肿瘤特异性新抗原来源。
中文摘要
癌症中异常的前体mRNA剪接产生的蛋白质序列在正常组织中罕见或缺失,为免疫治疗提供了丰富的肿瘤特异性新抗原来源。这些剪接衍生的新抗原通过多种机制产生,包括核心剪接体组分(SF3B1、SRSF2、U2AF1和ZRSR2)的复发性体细胞突变、转座元件表观遗传去抑制导致嵌合外显子-TE连接的形成,以及缺乏剪接体编码突变的癌症中剪接调控网络的协同失调。这些过程产生两大类免疫治疗靶点:1)可被T细胞疗法识别的MHC I类限制性新肽,以及2)跨膜蛋白中的细胞外新表位(ExNeoEpitopes),可被非HLA依赖性抗体模态所触及,包括单克隆抗体(mAbs)、双特异性衔接器(BiTEs)、抗体-药物偶联物(ADCs)以及嵌合抗原受体(CAR)-T或CAR-NK细胞。尽管具有强大的免疫原性潜力,有效的治疗开发需要克服关键的免疫学障碍,包括T细胞耗竭、MHC-I下调导致的抗原呈递受损以及肿瘤微环境内的免疫抑制。计算新抗原预测、免疫肽组学、表面蛋白质组学、长读长和单细胞异构体测序以及AI引导的治疗设计方面的最新进展,正在使剪接衍生靶点的发现和验证更加系统化。本综述整合了关于剪接新抗原的生物学起源、免疫学障碍、靶点类别以及推动其在癌症免疫治疗中进展的技术的当前认识。
展开英文摘要原文
Aberrant pre-mRNA splicing in cancer generates protein sequences that are rare or absent in normal tissues, creating a rich source of tumor-specific neoantigens for immunotherapy. These splicing-derived neoantigens arise through diverse mechanisms, including recurrent somatic mutations in core spliceosome components ( SF3B1 , SRSF2 , U2AF1 , and ZRSR2 ), epigenetic derepression of transposable elements that give rise to chimeric exon-TE junctions, and coordinated dysregulation of splicing regulatory networks in cancers lacking spliceosome coding mutations. These processes produce two major classes of immunotherapeutic targets: 1) MHC class I-restricted neopeptides that can be recognized by T-cell-based therapies, and 2) extracellular neoepitopes (ExNeoEpitopes) within transmembrane proteins that are accessible to HLA-independent antibody-based modalities, including monoclonal antibodies (mAbs), bispecific engagers (BiTEs), antibody-drug conjugates (ADCs), and chimeric antigen receptor (CAR)-T or CAR-NK cells. Despite their strong immunogenic potential, effective therapeutic exploitation requires overcoming key immunological barriers, including T-cell exhaustion, impaired antigen presentation through MHC-I downregulation, and suppression within the tumor microenvironment. Recent advances in computational neoantigen prediction, immunopeptidomics, surface proteomics, long-read and single-cell isoform sequencing, and AI-guided therapeutic design are enabling more systematic discovery and validation of splicing-derived targets. This review integrates current understanding of the biological origins, immunological barriers, target classes of splicing neoantigens, and the technologies that enable their advancement in cancer immunotherapy.
论文信息
- 作者
- Tang M、Grimes HL、Salomonis N
- 第一作者单位
- Division of Immunobiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, United States.United States
- 通讯作者单位
- Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, United States.United States
- 文献类型
- 综述
- 期刊
- Frontiers in immunology2026