决定异体 CAR T 细胞排斥与扩增的细胞和分子机制
Cellular and molecular mechanisms determining allogeneic CAR T cell rejection and expansion.
我们评估了11例接受单一批次cemacabtagene ansegedleucel(cema-cel)治疗的大B细胞淋巴瘤患者,cemacabtagene ansegedleucel是一种异体抗CD19 CAR T产品。
英文原题:From antigen to atlas: A multi-omics, single-cell pipeline for discovering safe and effective CAR targets in ovarian cancer.
嵌合抗原受体(CAR)T细胞疗法在血液系统恶性肿瘤中取得了显著成功,但在卵巢癌(OC)等实体瘤中仍面临重大障碍,主要归因于抗原异质性和靶向非肿瘤毒性。
嵌合抗原受体(CAR)T细胞疗法在血液系统恶性肿瘤中取得了显著成功,但在卵巢癌(OC)等实体瘤中仍面临重大障碍,主要原因是抗原异质性和靶向/脱靶毒性。依赖批量组织分析的传统发现方法不足以克服这些挑战。本综述提出了一种范式转变,即采用全面的、多组学、单细胞流程来对OC中安全有效的CAR靶点进行分级和验证。我们建立了一个三级同质性分类系统(A级至C级),该系统直接指导工程策略,从A级靶点的单一疗法到B级靶点的组合靶向,以及对C级靶点的降级处理。以CLDN18.2作为验证案例,我们展示了该流程如何根据同质性水平对靶点进行分类,并制定具体的治疗解决方案。我们详细描述了一个序贯框架,该框架整合了批量组学图谱、单细胞和空间转录组学、糖蛋白质组学和免疫表型分析,以解构肿瘤复杂性和免疫抑制微环境。这些数据输入一个计算优先级排序漏斗,根据肿瘤特异性、同质性、肿瘤微环境(TME)适应性和必要性对候选抗原进行评分。随后,我们概述了一个分层实验验证路径,从患者来源的类器官(PDOs)到体内安全性模型。通过claudin 18.2(CLDN18.2)的案例研究,展示了这种图谱驱动方法的实际效用,其中整合的多组学数据诊断指导了合理的工程策略,如组合靶向和亲和力调谐,以减轻局限性。最后,我们讨论报告标准、实际可行性和未来方向,强调人工智能和协作图谱的变革潜力。这一整体流程旨在弥合计算发现与临床上可行的下一代CAR-T疗法之间的关键差距,以用于卵巢癌。
Chimeric antigen receptor (CAR) T-cell therapy has achieved remarkable success in hematologic malignancies but continues to face significant barriers in solid tumors such as ovarian cancer (OC), primarily due to antigen heterogeneity and on-target, off-tumor toxicity. Traditional discovery methods that rely on bulk tissue analyses are inadequate to overcome these challenges. This review proposes a paradigm shift toward a comprehensive, multi-omics, single-cell pipeline for the grading and validation of safe and effective CAR targets in OC. We establish a three-tiered homogeneity classification system (Grades A through C) that directly informs engineering strategies, from monotherapy for Grade A targets to combinatorial targeting for Grade B targets and deprioritization for Grade C targets. Using CLDN18.2 as a validation case, we demonstrate how this pipeline classifies targets according to homogeneity levels and prescribes specific therapeutic solutions. We detail a sequential framework that integrates bulk omics atlases, single-cell and spatial transcriptomics, glycoproteomics, and immune phenotyping to deconstruct both tumor complexity and the immunosuppressive microenvironment. These data feed into a computational prioritization funnel that scores candidate antigens based on tumor specificity, homogeneity, tumor microenvironment (TME) fitness, and essentiality. We then outline a tiered experimental validation pathway, from patient-derived organoids (PDOs) to in vivo safety models. The practical utility of this atlas-driven approach is demonstrated through a case study on claudin 18.2 (CLDN18.2), in which integrated multi-omics data diagnosis inform rational engineering strategies such as combinatorial targeting and affinity tuning to mitigate limitations. Finally, we discuss reporting standards, practical feasibility, and future directions, emphasizing the transformative potential of artificial intelligence and collaborative atlases. This holistic pipeline aims to bridge the critical gap between computational discovery and clinically viable, next-generation CAR-T therapies for ovarian cancer.
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