决定异体 CAR T 细胞排斥与扩增的细胞和分子机制
Cellular and molecular mechanisms determining allogeneic CAR T cell rejection and expansion.
我们评估了11例接受单一批次cemacabtagene ansegedleucel(cema-cel)治疗的大B细胞淋巴瘤患者,cemacabtagene ansegedleucel是一种异体抗CD19 CAR T产品。
英文原题:Heterogeneous characteristics of γδ T cells in peripheral blood of diffuse large B-cell lymphoma.
我们在DLBCL患者中识别出具有不同基因型和临床特征的γδ T细胞遗传亚型。这些亚组内的表达水平成为患者预后的潜在指标,以及制定治疗策略的关键因素。这些见解显著推进了我们对细胞亚群之间复杂关系及其在影响疾病进展和患者预后中作用的理解。
弥漫性大B细胞淋巴瘤(DLBCL)是一种高度异质性的疾病,具有多变的临床和分子特征。研究已强调γδ T细胞在白血病患者生存中的重要作用。然而,γδ T细胞的异质性及其对DLBCL患者外周血临床相关性的影响仍不清楚。
采用scRNA-seq对9份血液样本进行检测,样本来源于6例弥漫性大B细胞淋巴瘤(DLBCL)患者和3名健康个体(HIs),以描绘DLBCL患者中具有临床相关性的γδ T细胞状态和亚群。随后采用流式细胞术验证DLBCL预后与γδ T细胞亚群之间的关系。
我们的研究通过共识聚类整合了遗传驱动因素,从而在DLBCL和HIs中鉴定出6个不同的γδ T细胞亚群。这些亚群包括:以TCF7和LEF1表达为特征的naïve γδ T细胞亚群,共享GZMK、IL7R等常见基因的记忆γδ T细胞亚群,过表达IFNG、TNF和CD69的抗肿瘤γδ T细胞亚群,以及两个表现出TIGIT过表达、提示耗竭γδ T细胞表型的亚群。此外,还鉴定出一个以NKG7和GZMB水平升高为标志的细胞毒性γδ T细胞亚群。我们的结果揭示,尽管γδ T细胞具有抗肿瘤能力,但其功能有效性因分化为耗竭亚群而减弱。若干具有高细胞毒性评分的聚类也显示出耗竭评分升高(C13-γδ-TIGIT.1、C14-γδ-TIGIT.2),提示DLBCL样本中存在一个同时处于耗竭和细胞毒性状态的群体。特别是,TIGIT.2 γδ T细胞亚群相对于TIGIT.1 γδ T细胞亚群表现出更明显的耗竭评分,表明这些群体之间存在细胞耗竭水平的差异。我们的分析揭示,TIGIT γδ T细胞亚群的高表达与患者较差的预后之间存在显著相关性。我们还发现了这些亚组内独特的表达谱:TIGIT.1 γδ T细胞以CXCR4表达升高为标志,而TIGIT.2 γδ T细胞亚组则表现出CX3CR1表达增加。拟时序分析提示,从naïve和GZMK γδ T细胞向各种终末分化亚群存在潜在的分化轨迹,且与干性相关的基因(如TCF-1)随后下调。这些发现表明,TIGIT。2亚群可能处于分化轨迹的更后阶段,可能代表比TIGIT.1亚群更终末分化的状态。根据我们的临床验证队列,TIGIT + γδ T细胞亚群在患者中高表达,并与不良预后相关。
BACKGROUND: Diffuse large B-cell lymphoma (DLBCL) is a highly heterogeneous disease with variable clinical and molecular features. Studies have highlighted the significant role of γδ T cells in the survival of leukemia patients. However, the heterogeneity of γδ T cells and their impact on clinical correlation in the peripheral blood of patients with DLBCL remain unclear. METHOD: Single-cell RNA sequencing (scRNA-seq) was employed on 9 blood samples, sourced from 6 patients with diffuse large B-cell lymphoma (DLBCL) and 3 healthy individuals (HIs), to delineate clinically pertinent γδ T cell states and subsets in DLBCL patients. Flow cytometry was then employed to validate the relationship between DLBCL prognosis and γδ T cell subsets. RESULT: Our study integrated genetic drivers through consensus clustering, leading to the identification of 6 distinct γδ T cell subsets in DLBCL and HIs. These subsets include a naïve γδ T cell subset characterized by TCF7 and LEF1 expression, a memory γδ T cell subset sharing common genes such as GZMK, IL7R, an anti-tumor γδ T cell subset with overexpression of IFNG, TNF, and CD69, and two subsets exhibiting TIGIT overexpression indicative of an exhausted γδ T cell phenotype. Additionally, a cytotoxic γδ T cell subset marked by increased NKG7 and GZMB levels was identified. Our results revealed that while γδ T cells possess anti-tumor capacities, their functional effectiveness is diminished due to differentiation into exhausted subpopulations. Several clusters with high cytotoxicity scores also showed elevated exhaustion scores (C13-γδ-TIGIT.1, C14-γδ-TIGIT.2), suggesting the presence of a population in DLBCL samples that is simultaneously exhausted and cytotoxic. In particular, the TIGIT.2 γδ T cell subset manifests a more pronounced exhaustion score relative to TIGIT.1 γδ T cell subset, indicating differential levels of cellular exhaustion among these groups. Our analysis reveals a significant correlation between high expression of TIGIT γδ T cell subsets and poorer patient prognoses. We also discovered unique expression profiles within these subgroups: TIGIT.1 γδ T cells are marked by elevated CXCR4 expression, contrasting with the TIGIT.2 γδ T cell subgroup which exhibits increased CX3CR1 expression. Pseudotime analysis implies a potential differentiation trajectory from naïve and GZMK γδ T cells to various terminally differentiated subsets, with genes associated with stemness (e.g., TCF-1) subsequently downregulated. These findings suggest that TIGIT.2 subset may be further along in the differentiation trajectory, potentially representing a more terminally differentiated state than TIGIT.1 subset. According to our clinical validation cohort, the TIGIT + γδ T cell subset is highly expressed in patients and correlates with poor prognosis. CONCLUSION: We identified genetic subtypes of γδ T cells with distinct genotypic and clinical characteristics in DLBCL patients. Expression levels within these subgroups emerged as potential indicators for patient outcomes and as crucial factors in shaping therapeutic strategies. These insights significantly advance our understanding of intricate relationships among cellular subgroups and their roles in influencing disease progression and patient prognosis.
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