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人类双阴性 T 细胞的单细胞 RNA 测序揭示了一种有利于癌症治疗的细胞特征

英文原题:Single-cell RNA sequencing of human double-negative T cells reveals a favorable cellular signature for cancer therapy.

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Single-cell RNA sequencing of human double-negative T cells reveals a favorable cellular signature for cancer therapy.

PubMed 2025/04/17(内容时间) J Immunother Cancer Q1 · IF 11.7(JCR 2025)

研究概要

这些结果突显了人类DNTs独特的转录、细胞和功能特征,并支持异体DNT疗法的持续临床研究。这些数据还提供了一个参考基因特征,可能有助于提高其他类型异体过继细胞疗法的疗效。

研究思路结论见上方概要

异体双阴性 T 细胞(DNT)疗法已成为一种新型的即用型细胞治疗,具有临床可行性、安全性以及对白血病的良好疗效。然而,DNT 的生物学特征尚不明确,且 DNT 疗法与传统 γδ T 细胞疗法的区别仍不清楚。总体而言,这阻碍了我们在癌症治疗中增强 DNT 功能的能力。在此,我们对 DNT 进行了单细胞 RNA 测序,并结合体外和体内功能分析。由于相当比例的 DNT 表达 Vγ9Vδ2(Vδ2)TCR 链,我们将 DNT 与供者匹配的、经唑来膦酸扩增的传统 Vδ2 T 细胞进行了比较。

健康供者来源的异体DNT和Vδ2 T细胞在体外扩增。对两种细胞产品进行单细胞RNA测序分析,以确定DNT内的转录图谱和推断的细胞相互作用,随后与供者匹配的Vδ2 T细胞进行比较。耗竭仅在DNT中发现的独特细胞亚群,以确定它们对DNT抗急性髓系白血病整体疗效的贡献。使用基于流式细胞术的细胞毒性试验、记忆表型分析和异种移植模型,探讨DNT和Vδ2 T细胞的抗白血病活性和体内持久性。

尽管细胞产品之间共享 Vδ2 表达,我们在 DNT 中发现了独特的细胞组成,这些组成相对于供体匹配的 Vδ2 T 细胞,促成了不同的转录和细胞通讯模式,包括在持久癌症缓解患者中持续存在的CAR-T 细胞中发现的基因表达更高。Vδ2 - DNT 表现出强大的持久性特征,并且在重复刺激试验中,它们的存在促进了 Vδ2 + DNT 的细胞毒性能力。DNT 的这种独特遗传特征和多样细胞组成导致与 Vδ2 T 细胞相比,在体外和体内具有更好的整体离体扩增、更长的持久性和优越的抗白血病活性。

展开英文摘要原文

BACKGROUND: Allogeneic double-negative T-cell (DNT) therapy has emerged as a novel, off-the-shelf cellular treatment with clinical feasibility, safety, and promising efficacy against leukemia. However, the biology of DNTs is less well characterized, and how DNT therapy distinguishes from conventional γδ T-cell therapy remains unclear. Collectively, this hinders our ability to bolster DNT functionalities in cancer therapy. Here, we performed single-cell RNA sequencing with in vitro and in vivo functional analysis on DNTs. As a significant proportion of DNTs express Vγ9Vδ2 (Vδ2) TCR chain, we compared DNTs with donor-matched conventional Vδ2 T cells expanded with zoledronic acid. METHODS: Healthy donor-derived allogeneic DNTs and Vδ2 T cells were expanded ex vivo. Single-cell RNA sequencing analysis was performed on both cellular products to identify the transcriptional landscape and inferred cellular interactions within DNTs, followed by comparisons with donor-matched Vδ2 T cells. Unique cellular subsets found only in DNTs were depleted to identify their contributions to the overall efficacy of DNTs against acute myeloid leukemia. The anti-leukemic activity and in vivo persistence of DNTs and Vδ2 T-cells were explored using flow cytometry-based cytotoxicity assays, memory phenotyping, and xenograft models. RESULTS: Despite a shared Vδ2 expression between cellular products, we identified unique cellular compositions in DNTs that contribute to distinct transcriptional and cellular communication patterns relative to the donor-matched Vδ2 T cells, including higher expression of genes identified in chimeric antigen receptor T cells that persist in patients with durable cancer-remission. Vδ2 - DNTs exhibited strong persistence characteristics, and their presence promoted the cytotoxic capabilities of Vδ2 + DNTs in repeated stimulation assays. This unique genetic signature and diverse cellular composition of DNTs resulted in better overall ex vivo expansion, prolonged persistence, and superior anti-leukemic activity compared with Vδ2 T cells in vitro and in vivo. CONCLUSIONS: These results highlight the unique transcriptional, cellular, and functional profile of human DNTs and support the continued clinical investigation of allogeneic DNT therapy. The data also provide a reference gene signature that may help improve the efficacy of other types of allogeneic adoptive cellular therapies.

论文信息

作者
Tin E、Khatri I、Fang K、Na Y、Nawata M、Arteaga J、Minden MD、Rutella S
第一作者单位
University Health Network, Toronto, Ontario, Canada.Canada
通讯作者单位
University Health Network, Toronto, Ontario, Canada li.zhang@uhnresearch.ca.Canada
期刊
Journal for immunotherapy of cancer2025 Apr 17
原文标识
PubMed 40246580 · DOI 10.1136/jitc-2024-010684