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整合多组学分析揭示 ZZZ3/CD70 轴是弥漫大 B 细胞淋巴瘤细胞-NK 细胞相互作用的超级增强子驱动调控因子

英文原题:Integrated multi-omics profiling reveals the ZZZ3/CD70 axis is a super-enhancer-driven regulator of diffuse large B-cell lymphoma cell-natural killer cell interactions.

PubMed 2024/09/23(内容时间) Exp Biol Med (Maywood) Q2 · IF 3.8(JCR 2025)

研究概要

DLBCL 细胞通过调控 ZZZ3/CD70 轴抑制浸润 NK 细胞的增殖与杀伤。

中文摘要

肿瘤免疫微环境对弥漫大 B 细胞淋巴瘤(DLBCL)的发生至关重要。然而,超级增强子(SE)调控 DLBCL 细胞与肿瘤浸润免疫细胞相互作用的机制仍很大程度上未知。本研究旨在调查 SE 调控基因在调节 DLBCL 细胞与肿瘤浸润免疫细胞相互作用中的作用。从 Heidelberg Open Research Data 数据库和 Gene Expression Omnibus 数据库下载单细胞 RNA 测序、整体 RNA 测序及 H3K27ac ChIP-seq 数据,并使用 HOMER 算法和 R 语言 Seurat 软件包进行生物信息学分析。采用 MTS 和乳酸脱氢酶(LDH)释放实验分别检测细胞增殖和 LDH 释放。结果显示,DLBCL 中 B 细胞簇与 CD8+ T 细胞簇及 NK 细胞簇之间的相互作用增强最为明显;CD70-CD27、MIF-CD74/CXCR2 复合体、MIF-CD74/CD44 复合体及 CCL3-CCR5 相互作用均显著增加。NK 细胞亚簇与 B 细胞簇的相互作用最强。ZZZ3 通过结合 CD70 的 SE 上调 CD70 转录。在 DOHH2 细胞中沉默 CD70,可显著促进共培养 NK92 细胞增殖,并增加 DOHH2 细胞 LDH 释放;DOHH2 细胞中过表达 ZZZ3 可抵消上述效应。沉默 CD70 联合阻断 PD-L1,可增加与 NK92 细胞共培养的 DOHH2 细胞 LDH 释放。总之,DLBCL 细胞通过调节 ZZZ3/CD70 轴,抑制浸润 NK 细胞的增殖和杀伤。靶向 ZZZ3/CD70 轴联合阻断 PD-L1 有望成为治疗 DLBCL 的有效策略。

展开英文摘要原文

Tumor immune microenvironment is crucial for diffuse large B-cell lymphoma (DLBCL) development. However, the mechanisms by which super-enhancers (SEs) regulate the interactions between DLBCL cells and tumor-infiltrating immune cells remains largely unknown. This study aimed to investigate the role of SE-controlled genes in regulating the interactions between DLBCL cells and tumor-infiltrating immune cells. Single-cell RNA-seq, bulk RNA-seq and H3K27ac ChIP-seq data were downloaded from the Heidelberg Open Research Data database and Gene Expression Omnibus database. HOMER algorithm and Seurat package in R were used for bioinformatics analysis. Cell proliferation and lactate dehydrogenase (LDH) release was detected by MTS and LDH release assays, respectively. Interaction between B cell cluster and CD8 + T cell and NK cell cluster was most obviously enhanced in DLBCL, with CD70-CD27, MIF-CD74/CXCR2 complex, MIF-CD74/CD44 complex and CCL3-CCR5 interactions were significantly increased. NK cell sub-cluster showed the strongest interaction with B cell cluster. ZZZ3 upregulated the transcription of CD70 by binding to its SE. Silencing CD70 in DOHH2 cells significantly promoted the proliferation of co-cultured NK92 cells and LDH release from DOHH2 cells, which was counteracted by ZZZ3 overexpression in DOHH2 cells. CD70 silencing combined with PD-L1 blockade promoted LDH release from DOHH2 cells co-cultured with NK92 cells. In conclusion, DLBCL cells inhibited the proliferation and killing of infiltrating NK cells by regulating ZZZ3/CD70 axis. Targeting ZZZ3/CD70 axis combined with PD-L1 blockade is expected to be a promising strategy for DLBCL treatment.

论文信息

作者
Li X、Cui J、Wang L、Cao C、Liu H
单位
Cancer Center, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital, Third Hospital of Shanxi Medical University, Taiyuan, Shanxi, China.China
文献类型
非美国政府资助研究
期刊
Experimental biology and medicine (Maywood, N.J.)2024
原文标识
PubMed 39376717 · DOI 10.3389/ebm.2024.10155