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免疫微环境相关基因图谱预测弥漫性大 B 细胞淋巴瘤的免疫化疗反应和预后

英文原题:Immune microenvironment-related gene mapping predicts immunochemotherapy response and prognosis in diffuse large B-cell lymphoma.

PubMed 2022/01/29(内容时间) Med Oncol Q2 · IF 4.7(JCR 2025)

研究概要

弥漫大B细胞淋巴瘤(DLBCL)是非霍奇金淋巴瘤(NHL)最常见的亚型。

中文摘要

弥漫大B细胞淋巴瘤(DLBCL)是非霍奇金淋巴瘤(NHL)最常见的亚型。R-CHOP免疫化疗方案是DLBCL患者的一线治疗选择,极大地改善了DLBCL的预后,使其成为一种可治愈的疾病。然而,耐药或复发是当前DLBCL治疗的主要挑战。研究表明,肿瘤微环境在DLBCL的发生、发展及药物反应性中发挥重要作用。本研究利用CIBERSORT算法解析了来自GEO数据库的471例DLBCL患者免疫微环境的组成。我们发现活化的记忆CD4+ T细胞和γδ T细胞与免疫化疗反应显著相关。利用免疫化疗应答者和无应答者的差异表达基因构建了加权基因共表达网络(WGCNA)。与这两类T细胞最相关的模块被定义为枢纽模块。枢纽模块的富集分析显示,应答者的基线免疫状态显著强于无应答者。构建了枢纽模块的蛋白-蛋白相互作用(PPI)网络以鉴定枢纽基因。经过生存分析,鉴定了五个与预后相关的基因(CD3G、CD3D、GNB4、FCHO2、GPR183),且这些基因均与PD1显著负相关。利用我们自己的患者队列,我们验证了CD3G和CD3D在预测免疫化疗反应方面的效能。我们的研究表明,CD3G、CD3D、GNB4、FCHO2和GPR183参与DLBCL免疫微环境的调控。它们可作为预测免疫化疗反应的生物标志物及DLBCL的潜在治疗靶点。

展开英文摘要原文

Diffuse large B-cell lymphoma (DLBCL) is the most common subtype of non-Hodgkin's lymphoma (NHL). The R-CHOP immunochemotherapy regimen is the first-line treatment option for DLBCL patients and has greatly improved the prognosis of DLBCL, making it a curable disease. However, drug resistance or relapse is the main challenge for current DLBCL treatment. Studies have shown that the tumor microenvironment plays an important role in the onset, development, and responsiveness to drugs in DLBCL. Here, we used the CIBERSORT algorithm to resolve the composition of the immune microenvironment of 471 DLBCL patients from the GEO database. We found that activated memory CD4+ T cells and γδ T cells were significantly associated with immunochemotherapy response. Weighted gene co-expression networks (WGCNA) were constructed using differentially expressed genes from immunochemotherapy responders and non-responders. The module most associated with these two types of T cells was defined as hub module. Enrichment analysis of the hub module showed that baseline immune status was significantly stronger in responders than in non-responders. A protein-protein interaction (PPI) network was constructed for hub module to identify hub genes. After survival analysis, five prognosis-related genes (CD3G, CD3D, GNB4, FCHO2, GPR183) were identified and all these genes were significantly negatively associated with PD1. Using our own patient cohort, we validated the efficacy of CD3G and CD3D in predicting immunochemotherapy response. Our study showed that CD3G, CD3D, GNB4, FCHO2, and GPR183 are involved in the regulation of the immune microenvironment of DLBCL. They can be used as biomarkers for predicting immunochemotherapy response and potential therapeutic targets in DLBCL.

论文信息

作者
Chen W、Liang W、He Y、Liu C、Chen H、Lv P、Yao Y、Zhou H
第一作者单位
Department of Blood Transfusion, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China.China
通讯作者单位
Department of Blood Transfusion, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China. zohoyo@hotmail.com.China
期刊
Medical oncology (Northwood, London, England)2022 Jan 29
原文标识
PubMed 35092504 · DOI 10.1007/s12032-021-01642-3